Gene Symbol | CASC1 |
Entrez Gene ID | 101834100 |
Full Name | cancer susceptibility 1 |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
ORF » Species Summary » Mesocricetus auratus » CASC1 cDNA ORF clone
Gene Symbol | CASC1 |
Entrez Gene ID | 101834100 |
Full Name | cancer susceptibility 1 |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
mRNA | Protein | Name |
---|---|---|
XM_005072998.3 | XP_005073055.2 | protein CASC1 |
XM_005072998.2 | XP_005073055.1 | protein CASC1 |
De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters.
McCann KE, Sinkiewicz DM, Norvelle A, Huhman KL
Scientific reports740472(2017 01)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following CASC1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CASC1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMe126460 | |
Clone ID Related Accession (Same CDS sequence) | XM_005072998.2 | |
Accession Version | XM_005072998.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2223bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | protein CASC1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801640.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 13, 2015 this sequence version replaced XM_005072998.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## |
1 | ATGACTTGCG CTGACAGCCT CTTTCATGTT GTGCTCCTCG TCAAGTCTGC CGGCAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005073055.1 |
CDS | 1..2223 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACTTGCG CTGACAGCCT CTTTCATGTT GTGCTCCTCG TCAAGTCTGC CGGCAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe249490 | |
Clone ID Related Accession (Same CDS sequence) | XM_005072998.3 | |
Accession Version | XM_005072998.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2181bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | protein CASC1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801640.1) and transcript sequence (GEMX01051544.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 22, 2017 this sequence version replaced XM_005072998.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 175 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTCTGCCG GCAAGAAAAA GATCACCAAA GCTGAGCGAC TGCGGCTCCT GCAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005073055.2 |
CDS | 173..2353 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTCTGCCG GCAAGAAAAA GATCACCAAA GCTGAGCGAC TGCGGCTCCT GCAGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. |